Browse of TCMCG008C00043 protein

CDS

Accession Number	TCMCG008C00043
gbkey	CDS
Protein Id	XP_029128877.1
Location	join(462125..462148,463194..463267,463342..463481,464473..464559,464689..464776,464856..464936,466424..466501,466586..466665,467782..467854,467943..468272,470332..470391,470891..471134,472036..472296,473315..474688,476091..476334,476418..476565,479994..480081,480176..480254,480682..480977,481870..482938,485219..485590,487552..488120)
Gene	LOC109795235
GeneID	109795235
Organism	Cajanus cajan

Protein

Length	1952aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376605
db_source	XM_029273044.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Cajanus cajan]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAGATATCATGGTTTCAGTTTCTTCCTCATGAACCTGACCTGAACCCTCTACCTGACAAAAGTGTAAAAGTGGACCAAAAGGACGCTGCAATGTTTATGGTGCTTTCATCACATCTGCAACTTCAGAAGGAGGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGTTTGCATAATCCAGACGAAAAGATAAAGTTGTGGCTTTTTCTTTCGGGGCGTCATTCATCAGTTGTTGAGACTGCTCAGCCAGCAGTATCTGGATTAAGAGTTGTTGCTTCTGGGCTTTGGTTGGCTCCTGGGGATTCAGAAGAGGTTGCAGCTGCTCTATCTCAGGCTTTGAGGAATCGTATAGAAAGAGCTTTGCATGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGAGAAGAACTATTCAGAAGAGGACAGCCTGCAGTTGAGTTTGTCTTTGCTGCGACCGAGGAGGCAATCTTCATACATGTCATAGTGTCCTCAAAGCATATCCGGATGCTTTCCACGGGTGATTTGGAAAAAGTATTAAGACATTCTACAGAGTCAGCCTATGGACTTCCAGGTTTGATTGTTTCTCTAATGCGTGGCAGCTTGACTGGTTGTTCACCTAGTGATCTGGTCAAACAAAGCTATTTCAGTTCTACCAAATATAGGGTGTCCAATGGAATTATAGGTCTCCCTAATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTATGTTGAAGTAAGTCTTGGCTCCCCTAGATCTGGAACTGACAACACATTTCAGCCAAACAAAATTAGTGTCAGGAATTTACCCAAACTTCATGTTGTTGAGTCTCCTATTATTGGACGAAGTGATCACAAGGGATCTCCAGATCATTTGTTGGATTATGAGAAAACATTTCTCTATCCAGCTGAGGCAGTGCTCGTGCCAATTTTGCAAACATCATTAGCAAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCCCTGCCTGGTTCCTCTTCCTTTATTCACTGTGCTGGTAATATGGATTGTACTGAAGATCCTTGGACTGAAATCAATGGAACTCGCACGCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCGAGTGAATTAGAGGCAGATGCTGATTCTTTAACGTGTAGACAGTCTATGGTATCTTCTGGTGATCAGTTGGAAAGTGATGGCCCCAAATTGGGCTCTAAGCGGTCTCGAACTGGAGTGACAGAGTTGTTAAGTACAGCTACAAACATCCCAGTGCAAGATGCTTACATGTCTGATTTTGTTTCCATGGAAGTGAACAATTCAGCCATTACAGGAGTAGGAAATGAACCAATTGGGTCTTACTGGGACTGGGATGATGATGATAGGGGCATGGAAATGGATATTCAAGCCCTTCTATCAGAGTTTGGTGATTTTGGTGATTTCTTCGAAAATGATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTGCGGAATCTCAGGCACTAATTTTTTCTGCTCCGGATTGTGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGATGTTGTTTCAGATCAAATACTTTTGCCTGTTGGGTTTCCTTCCTTTGAGAGCTATAACCCCCCTCCTTCAGCAGCCATGGAGGAATGTCTTAACAAAAGTCAAGATAACTTGAATAACTCCATGTCTTCGGGTCCAACCAATCAAACTCAAATGTTGTATACGAGGGAGTTTGATCATATAATGAAAGCTGAAGCAATGATGACATTTGCTCCTGAATTTGGAGCTGTGGAGACCCCTACTTCTGAGTTGTCCACAACAATTTTCAGAAGCCCATATTTTCCAAAATCTCTAAAAGCAGAGAGTTCAAATTCAAGTTCAAACAATTACTTATACGGTGCAGCACCGCCCTCTTCTCCCTGCACTGAAGGATCAGAGGGGAAGAATGGAGTGGTTGTCAATACAAAAAAAGGTTCTGGAAAACATGATGCAAGTATGAGTCTCCACTCAAAAAATTGCTATACTTTTGTGGAGAGCCAGAAGGAAAAAAGTGATAAAAATCCTGTCACATGTAATGATAACAGCATTGCTAAATCTGAGGGGCTAGCGCCACTCTCAAACATTGGTTCTAATGCTATTGTTAAGTCTTCCCTAAGGAAGATGACTGAATGCACACATGAAGCAGAGCATCACCTTCTATCTGCAAAAACTTTGCTGGCAACTGATATTACATGTGTTATGTTGCAAGCTTCCATGTGCAGGTTACGCCATATTCTCTTATCTTCAACTAACCTAATGCCTATTGGTTTAAGTAGGTCCAATGGGGTTTCATTTTTGAATCAGCTTCCTAGCGACCCAAGTATCACCACAGAAAACATATCAGGCAAGTTTGATGTGAAGAAGAAAGAAAATATACCAATTAGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGTCACCTTAATGCTCCTATTGGTGTTTGGCGCACATTAGGAGCTTCAAAAGTTGTAAAACCTTCAAATTCACCTAACATGGAAGTTGGTCCTTCCTTTTCTCATAATTCTTTCAATGAAGAAGGTATCCTTTCTTACGGTCAAAGGAAACCACTTCAGGAGCTTCTTGACGGGATTGCATTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGCGGATTGTGGTGATGGTCCATATGGTCTGCTTGCACTGCAAGAACAATGGAGGCGTGGATTTTGTTGTGGGCCTTCCATGGTCCATGCTGGCTGTGGGGGAACTCTTGCCTCTTCTCATTCACTGGACATTGCTGGCTTGGAGTTAGTGGATCCACTTTCTGCAGATGTTCATGCATCCACTGTCATCAGTTTGCTACAGTCTGACATAAAAACAGCTTTGAAATCTGCTTTTCCCAACTTGGAAGGGCCATTAACTGTAACTGATTGGTGTAAAGGACGCAATCAATTGGTTGATACTGGAAGCATAGTTGACGGAGTTTCTGCTGAATCCAGTATAAATGAATGTAGGGATTCTTCAGAACCAATGAGTCCATCCCAGTCATCTGTTGGTGGATCATCCACTATTAAGGTTTCCAGCATGATGGATAGTGCTAAGGTGGATGAGACTTCTCAAAGGAGATCTGGTCAAGATTCATGCAGTACAGAGTCAGAGCAGCAACTATGTTCCCGGCTAAAACCTACTCTCATTGCTCTTCCGTTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGACATCAGCGAACTCTTTGCAGCACTGGGAAAAGGCTCCTCTAGAGCCCTATGCTCTACAGAAGCCTGTTACGTACCATGTTGTATGTCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTTGGAACAGTTTATGAGACATGCAAGCTAGGTACTCATTCACCTCAAGCCTTGGGGAATCAGATGGAGATAGAGTCTGCAAAGTTGTCATCTTGTGGTTTTGTTCTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCAATACATCTCTAGTTGGTTCAGTAAGTGATTACTTTTTATCTTTATCTAATGGTTGGGACCTGGCTAGCTATCTCAAGTCTCTTTCAAAGGCACTTAGAGGGCTGAAAATTGGCTCTTGCTTTTCTACAAACCCTAGTGAAGGAAGTAACAGTTCATGCTTGGTTATCTATGTGGTGTGCCCGTTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCAGTTGCCATTGGATCGGTTGTCCAACAGTCAGATAGAGAGAGGAGATCTAGCTTGCATAGTCAGGTTGTGAAGGCATTAAGTGGCTTGGCTACTGTTGACGAAGCTTCAGCAGCTAATATCCTTGTGCTTTCTGGGTTTAGTATTCCAAAATTGGTCTTGCAGATAGTTACAGTGGATGCCATTTTCAGAGTCACAAGTCCATCTGTTAGTGAGCTTGTCATTTTAAAAGAGACTGCCTTTACTGTATACAGCAAGGCTCGTCGCATTTCACGTGGAATCTCTAGTGATTTTTCTCAATCAGCTTTTTCTAGTAGATCTCATTCTGTTTTGACACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTTGGCCCTCGAATGGCAGGACATTCTCTTCCTAGGGAGGGTGACATTGATGCTAGCTTGAGACCTGGTACTTGGGATAATTCTTGGCAATCAACAAGGACTGGGGGTTTAAACTGTGATCCAAGTAGAACTGGTGATATTTTTCTTCATGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTTTCAGAATCAGGTTCTCCTGAAAATGGTATTTCAGTTATTGGTAGCCCCACTTCAGAATCTTCCAAGGCATTGACAGATGATAGTAGTGGTAGCTATTTACAGAATACGAGTACTGCTGGAAGTTTGGAGTCTGCTTCAAGCACTGATGGATCTGGGTCTGATCCAAAGACTCCTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCGAGAGGAGAATTGCTGGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAGGGTCTGCAGTGCCTGTTTGTTCAAATTCTCCAGCAAGGTTGTCTAATACTTCAATCTTGTGATCCTGGCCTTGCAAAGCCTCGGGATTTTGTGATAGCACGCATTGGAGGGTTTTATGAGCTTGAGTACCTTGAGTGGCAGAAAGCCATTTATTCTGTTGGTGTGTCTGAGATGAAGAGGTGGCCTTTGCAATTGCGGAAATCTATGTCTGATGGGATGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAACCAGATATGAGTTTGATCCCAGAAAGAACTCTTCCTTCCTCACCTAGTCCTTTGTACAGCCCTCATACCAAATCCACTGGTTTTATGAAAGGCGGTTTGGGGCAACCTGCTGCAAGAAAGCAGCTTATGGGTGGACATTCTGTGGTTGACAATTCAAGGGGTTTGCTTCATTGGGCCCAGAGCATTAGTTTTGTTGCAGTTTCCATGGATCACACGTTACAACTAGTTCTCCAAGCAGATTCGTCTACTCCTGGTTACATAGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACGTCTTCTGCATATATTCTAATTCCTTCTCCCAGCATGCGGTTCCTTCCTCCAACAGGTCTTCAACTCCCCACATGCCTCACAGCAGAGTCGCCACCGCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCTCTTTCTACTGGATTTGTGGTTTCAAAAGCAGTACCTTCTATGAGGAAGGACTATAGAAGCAACCTGAAAGAAGAATGGCCCTCTATACTTTCTGTGAGCCTCATTGATTATTATGGAGGTGCTAACATCCCCCAAGAGAAGATTGTCCGGGGAGTTAACAAGCAAGGTGGTAGAAGTTTAAACTGGGAAGCCAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTCTTGCAGCAGAGCTTCATGCCTTGTCATGGATGACAGTGAGCCCCACATACCTAGAGCGGCGAACAGCACTTCCCTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCATTTTGCTGATAAAGAGCTCTCCAAGCAGTCTGAGAAATCTTGA

Protein:   MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMFMVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLSGRHSSVVETAQPAVSGLRVVASGLWLAPGDSEEVAAALSQALRNRIERALHGLYYMRFGDVFSKFHQFQREELFRRGQPAVEFVFAATEEAIFIHVIVSSKHIRMLSTGDLEKVLRHSTESAYGLPGLIVSLMRGSLTGCSPSDLVKQSYFSSTKYRVSNGIIGLPNHVSQGVGCQLRGQNCYVEVSLGSPRSGTDNTFQPNKISVRNLPKLHVVESPIIGRSDHKGSPDHLLDYEKTFLYPAEAVLVPILQTSLARSSLRRFWLQNWMGPSLPGSSSFIHCAGNMDCTEDPWTEINGTRTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSGDQLESDGPKLGSKRSRTGVTELLSTATNIPVQDAYMSDFVSMEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALIFSAPDCGDVNSSPGGVIDVVSDQILLPVGFPSFESYNPPPSAAMEECLNKSQDNLNNSMSSGPTNQTQMLYTREFDHIMKAEAMMTFAPEFGAVETPTSELSTTIFRSPYFPKSLKAESSNSSSNNYLYGAAPPSSPCTEGSEGKNGVVVNTKKGSGKHDASMSLHSKNCYTFVESQKEKSDKNPVTCNDNSIAKSEGLAPLSNIGSNAIVKSSLRKMTECTHEAEHHLLSAKTLLATDITCVMLQASMCRLRHILLSSTNLMPIGLSRSNGVSFLNQLPSDPSITTENISGKFDVKKKENIPIRIAGDIDGGMLDGHLNAPIGVWRTLGASKVVKPSNSPNMEVGPSFSHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLALQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAFPNLEGPLTVTDWCKGRNQLVDTGSIVDGVSAESSINECRDSSEPMSPSQSSVGGSSTIKVSSMMDSAKVDETSQRRSGQDSCSTESEQQLCSRLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPVTYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQALGNQMEIESAKLSSCGFVLLDCPQSMKIESSNTSLVGSVSDYFLSLSNGWDLASYLKSLSKALRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQSDRERRSSLHSQVVKALSGLATVDEASAANILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYSKARRISRGISSDFSQSAFSSRSHSVLTQMPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQSTRTGGLNCDPSRTGDIFLHDEIRYMFEPLFILSESGSPENGISVIGSPTSESSKALTDDSSGSYLQNTSTAGSLESASSTDGSGSDPKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLILQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGMSATSNGSSLQQPDMSLIPERTLPSSPSPLYSPHTKSTGFMKGGLGQPAARKQLMGGHSVVDNSRGLLHWAQSISFVAVSMDHTLQLVLQADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTGLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSILSVSLIDYYGGANIPQEKIVRGVNKQGGRSLNWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS